SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_148800150
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: TC-71
Genomic region: chr12:54248796-54285033
Size: 36237
Super-enhancer rank 150
Number of SE elements: 8
ChIP density(Case|Control): 32656.7844|4170.8787
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CBX5 ;
ROSE Overlap CBX5 ; HNRNPA1 ;
ROSE Proximal COPZ1 ; NFE2 ; MIR3198-2 ;
ROSE Closest CBX5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CBX5 ; SMUG1 ; COPZ1 ; NFE2 ; LOC102724050 ; HNRNPA1 ; MIR3198-2 ; MIR148B ; GPR84 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_148800150 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers