SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_148800112
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: TC-71
Genomic region: chr17:47978504-48027175
Size: 48671
Super-enhancer rank 112
Number of SE elements: 14
ChIP density(Case|Control): 38635.0398|5436.5507
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDK5RAP3 ;
ROSE Overlap CDK5RAP3 ; COPZ2 ;
ROSE Proximal PNPO ; NFE2L1 ; PRR15L ; CDK5RAP3 ; SP2-AS1 ; MIR152 ;
ROSE Closest CDK5RAP3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PNPO ; PRR15L ; CDK5RAP3 ; CBX1 ; SP2-AS1 ; COPZ2 ; MIR152 ; NFE2L1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_148800112 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers