SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_143500703
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Trophoblast
Biosample name: trophoblast stem cells_MSX2_KD
Genomic region: chr7:55046597-55079204
Size: 32607
Super-enhancer rank 703
Number of SE elements: 6
ChIP density(Case|Control): 13910.1462|4154.1318
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EGFR;
ROSE Overlap EGFR;
ROSE Proximal ;
ROSE Closest EGFR;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_143500703 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers