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Super-enhancer overview

SE ID: SE_02_143500664
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Trophoblast
Biosample name: trophoblast stem cells_MSX2_KD
Genomic region: chr15:41944564-41982545
Size: 37981
Super-enhancer rank 664
Number of SE elements: 6
ChIP density(Case|Control): 14782.2052|4755.2212
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EHD4;
ROSE Overlap PLA2G4E-AS1; PLA2G4E; EHD4;
ROSE Proximal EHD4-AS1;
ROSE Closest EHD4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_143500664 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers