SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_143500663
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Trophoblast
Biosample name: trophoblast stem cells_MSX2_KD
Genomic region: chr7:130349847-130374848
Size: 25001
Super-enhancer rank 663
Number of SE elements: 4
ChIP density(Case|Control): 13083.0233|3055.1222
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CPA5;
ROSE Overlap CPA5;
ROSE Proximal CPA1;
ROSE Closest CPA5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_143500663 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers