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Super-enhancer overview

SE ID: SE_02_143500282
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Trophoblast
Biosample name: trophoblast stem cells_MSX2_KD
Genomic region: chr3:39000405-39030703
Size: 30298
Super-enhancer rank 282
Number of SE elements: 5
ChIP density(Case|Control): 19242.2598|4247.7796
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WDR48;
ROSE Overlap ;
ROSE Proximal WDR48; SCN11A;
ROSE Closest WDR48;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_143500282 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers