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Super-enhancer overview

SE ID: SE_02_143500146
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Trophoblast
Biosample name: trophoblast stem cells_MSX2_KD
Genomic region: chr19:10593392-10628691
Size: 35299
Super-enhancer rank 146
Number of SE elements: 3
ChIP density(Case|Control): 23893.8931|4041.7355
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC44A2;
ROSE Overlap SLC44A2;
ROSE Proximal ILF3-AS1; AP1M2; CDKN2D; ILF3; ATG4D; MIR1238; KRI1;
ROSE Closest SLC44A2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_143500146 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers