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Super-enhancer overview

SE ID: SE_02_143500118
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Trophoblast
Biosample name: trophoblast stem cells_MSX2_KD
Genomic region: chr11:57761149-57799676
Size: 38527
Super-enhancer rank 118
Number of SE elements: 7
ChIP density(Case|Control): 26348.6153|5074.0059
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CTNND1;
ROSE Overlap CTNND1; TMX2-CTNND1;
ROSE Proximal CTNND1; BTBD18; TMX2; C11orf31; MED19;
ROSE Closest CTNND1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_143500118 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers