SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_143400374
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Trophoblast
Biosample name: trophoblast stem cells
Genomic region: chr5:87227689-87278408
Size: 50719
Super-enhancer rank 374
Number of SE elements: 9
ChIP density(Case|Control): 28641.0193|6816.6336
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC55338;
ROSE Overlap RASA1; LOC101929380; LOC55338;
ROSE Proximal LOC644285;
ROSE Closest LOC55338;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_143400374 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers