SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_143300239
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: A673 STAG2 null
Genomic region: chr19:46339325-46448325
Size: 109000
Super-enhancer rank 239
Number of SE elements: 38
ChIP density(Case|Control): 34553|10823.7
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCDC8;
ROSE Overlap HIF3A; PPP5C; CCDC8;
ROSE Proximal PPP5C; PNMAL2; PNMAL1;
ROSE Closest CCDC8;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_143300239 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers