SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_142901042
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: GM12878_WT
Genomic region: chr12:113204392-113233644
Size: 29252
Super-enhancer rank 1042
Number of SE elements: 8
ChIP density(Case|Control): 15009.2012|3957.7956
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IQCD;
ROSE Overlap TPCN1; IQCD;
ROSE Proximal TPCN1; RITA1; DDX54; MIR7106;
ROSE Closest IQCD;
Lasso DDX54; CCDC42B; RASAL1; TPCN1; RITA1;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_142901042 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers