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Super-enhancer overview

SE ID: SE_02_142900132
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: GM12878_WT
Genomic region: chr11:65454786-65508331
Size: 53545
Super-enhancer rank 132
Number of SE elements: 15
ChIP density(Case|Control): 38402.474|6543.199
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MALAT1;
ROSE Overlap MALAT1;
ROSE Proximal SCYL1; LTBP3; NEAT1; MIR612;
ROSE Closest MALAT1;
Lasso FRMD8; DPF2; SCYL1; SLC25A45; EHBP1L1; SSSCA1; AP000769.1; FAM89B; SIPA1; LTBP3; CAPN1; RELA; POLA2; CDC42EP2; PCNXL3; TIGD3;
PreSTIGE NEAT1; SLC25A45;

Network diagram of super-enhancer and associated genes

Expression of SE_02_142900132 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers