SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_142801003
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Shoulder
Biosample name: fibroblast_316
Genomic region: chr19:1016544-1029674
Size: 13130
Super-enhancer rank 1003
Number of SE elements: 5
ChIP density(Case|Control): 21843.068|1490.255
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM259;
ROSE Overlap TMEM259; RNU6-1; RNU6-9; CNN2;
ROSE Proximal HMHA1; ABCA7; GRIN3B; TMEM259; WDR18;
ROSE Closest TMEM259;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_142801003 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers