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Super-enhancer overview

SE ID: SE_02_135500611
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Umbilical cord
Biosample name: umbilical cord-derived mesenchymal stem cells_old
Genomic region: chr12:2243802-2269909
Size: 26107
Super-enhancer rank 611
Number of SE elements: 4
ChIP density(Case|Control): 34912.8911|6863.5303
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CACNA1C-IT3;
ROSE Overlap CACNA1C-IT3; CACNA1C;
ROSE Proximal CACNA1C-AS4;
ROSE Closest CACNA1C-IT3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_135500611 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers