SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_135401006
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MDA-MB-231-Erbeta_E2_TNFa
Genomic region: chr13:46160253-46183360
Size: 23107
Super-enhancer rank 1006
Number of SE elements: 8
ChIP density(Case|Control): 19747.2422|3604.692
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LCP1;
ROSE Overlap LCP1;
ROSE Proximal LRRC63;
ROSE Closest LCP1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_135401006 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers