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Super-enhancer overview

SE ID: SE_02_135300906
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MDA-MB-231-Erbeta_TNFa
Genomic region: chrX:153969745-153973705
Size: 3960
Super-enhancer rank 906
Number of SE elements: 1
ChIP density(Case|Control): 18741.888|896.148
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HCFC1;
ROSE Overlap HCFC1; TMEM187; HCFC1-AS1;
ROSE Proximal MIR3202-1; NAA10; IRAK1; ARHGAP4; MIR718; MIR3202-2; RENBP;
ROSE Closest HCFC1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_135300906 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers