SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_135300170
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MDA-MB-231-Erbeta_TNFa
Genomic region: chr17:4944549-4951158
Size: 6609
Super-enhancer rank 170
Number of SE elements: 2
ChIP density(Case|Control): 40801.3224|1901.4093
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PFN1;
ROSE Overlap ENO3; RNF167; PFN1;
ROSE Proximal ENO3; CAMTA2; GP1BA; KIF1C; C17orf107; MIR6865; SLC25A11; CHRNE; INCA1; MIR6864; SPAG7;
ROSE Closest PFN1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_135300170 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers