SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_133000624
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: AMU-AML1
Genomic region: chr5:142006378-142055154
Size: 48776
Super-enhancer rank 624
Number of SE elements: 11
ChIP density(Case|Control): 20485.92|6306.7368
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GNPDA1 ;
ROSE Overlap GNPDA1 ;
ROSE Proximal RNF14 ; PCDH12 ;
ROSE Closest GNPDA1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RNF14 ; PCDH12 ; NDFIP1 ; GNPDA1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_133000624 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers