SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_133000473
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: AMU-AML1
Genomic region: chr20:56417129-56471411
Size: 54282
Super-enhancer rank 473
Number of SE elements: 17
ChIP density(Case|Control): 23411.8266|6796.1064
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RTFDC1 ;
ROSE Overlap CASS4 ; RTFDC1 ;
ROSE Proximal CSTF1 ; AURKA ;
ROSE Closest RTFDC1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RTFDC1 ; AURKA ; CSTF1 ; CASS4 ; GCNT7 ; FAM209B ; FAM210B ; FAM209A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_133000473 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers