SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_133000420
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: AMU-AML1
Genomic region: chr19:13979394-14026099
Size: 46705
Super-enhancer rank 420
Number of SE elements: 9
ChIP density(Case|Control): 24095.1095|6300.5045
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RFX1 ;
ROSE Overlap RFX1 ;
ROSE Proximal LOC113230 ; MIR1199 ; RLN3 ; PALM3 ; DCAF15 ; IL27RA ; PODNL1 ;
ROSE Closest RFX1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PODNL1 ; C19orf57 ; SAMD1 ; MIR1199 ; IL27RA ; CC2D1A ; C19orf67 ; PALM3 ; LOC113230 ; RLN3 ; DCAF15 ; RFX1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_133000420 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers