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Super-enhancer overview

SE ID: SE_02_132500501
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Hindbrain
Biosample name: Hindbrain derived neural stem cells_NS19_H3.3K27M_WT
Genomic region: chr17:44086446-44111282
Size: 24836
Super-enhancer rank 501
Number of SE elements: 5
ChIP density(Case|Control): 9333.3688|1892.5032
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HDAC5;
ROSE Overlap HDAC5;
ROSE Proximal G6PC3; HDAC5; C17orf53; LSM12;
ROSE Closest HDAC5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_132500501 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers