SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_132200902
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Connective Tissue
Biosample name: HT1080_WT
Genomic region: chr9:35687862-35691596
Size: 3734
Super-enhancer rank 902
Number of SE elements: 1
ChIP density(Case|Control): 20437.6756|905.1216
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TPM2;
ROSE Overlap TPM2;
ROSE Proximal CCDC107; RMRP; MIR6852; SIT1; ARHGEF39; MIR6853; TLN1; CA9; CREB3;
ROSE Closest TPM2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_132200902 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers