SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_132001313
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Connective Tissue
Biosample name: HT1080_EWS-FLI1
Genomic region: chr19:41350997-41354422
Size: 3425
Super-enhancer rank 1313
Number of SE elements: 1
ChIP density(Case|Control): 17947.3425|597.6625
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TGFB1 ;
ROSE Overlap B9D2 ; TGFB1 ;
ROSE Proximal TMEM91 ; EXOSC5 ; CCDC97 ; BCKDHA ;
ROSE Closest TGFB1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMEM91 ; ATP5SL ; ERICH4 ; HNRNPUL1 ; CCDC97 ; BCKDHA ; TGFB1 ; EXOSC5 ; B9D2 ; B3GNT8 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_132001313 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers