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Super-enhancer overview

SE ID: SE_02_132001239
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Connective Tissue
Biosample name: HT1080_EWS-FLI1
Genomic region: chr19:19444037-19463320
Size: 19283
Super-enhancer rank 1239
Number of SE elements: 4
ChIP density(Case|Control): 20800.5721|2464.3674
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GATAD2A ;
ROSE Overlap GATAD2A ;
ROSE Proximal MIR640 ; GATAD2A ;
ROSE Closest GATAD2A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA YJEFN3 ; MIR640 ; TSSK6 ; GATAD2A ; CILP2 ; NDUFA13 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_132001239 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers