SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_132001176
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Connective Tissue
Biosample name: HT1080_EWS-FLI1
Genomic region: chr1:9872506-9908000
Size: 35494
Super-enhancer rank 1176
Number of SE elements: 12
ChIP density(Case|Control): 24057.8332|5086.2902
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CTNNBIP1 ;
ROSE Overlap CTNNBIP1 ;
ROSE Proximal LZIC ; NMNAT1 ; CLSTN1 ; CTNNBIP1 ;
ROSE Closest CTNNBIP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CLSTN1 ; NMNAT1 ; CTNNBIP1 ; MIR5697 ; LZIC ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_132001176 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers