SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_132001090
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Connective Tissue
Biosample name: HT1080_EWS-FLI1
Genomic region: chr21:33967778-33978100
Size: 10322
Super-enhancer rank 1090
Number of SE elements: 6
ChIP density(Case|Control): 21296.3504|1326.377
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC00649 ;
ROSE Overlap LINC00649 ;
ROSE Proximal LINC00649 ;
ROSE Closest LINC00649 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC00649 ; ATP5O ; LOC400863 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_132001090 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers