SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_132001081
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Connective Tissue
Biosample name: HT1080_EWS-FLI1
Genomic region: chr12:52945249-52952261
Size: 7012
Super-enhancer rank 1081
Number of SE elements: 3
ChIP density(Case|Control): 20958.868|870.1892
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KRT18 ;
ROSE Overlap KRT18 ; KRT8 ;
ROSE Proximal KRT8 ;
ROSE Closest KRT18 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TNS2 ; KRT18 ; KRT78 ; EIF4B ; KRT8 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_132001081 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers