SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_132000690
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Connective Tissue
Biosample name: HT1080_EWS-FLI1
Genomic region: chr6:26121199-26140549
Size: 19350
Super-enhancer rank 690
Number of SE elements: 10
ChIP density(Case|Control): 29313.315|2422.62
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H2AC ;
ROSE Overlap HIST1H2AC ; HIST1H2BC ;
ROSE Proximal HFE ; HIST1H2BE ; HIST1H4D ; HIST1H2BD ; HIST1H1E ; HIST1H1T ; HIST1H4C ;
ROSE Closest HIST1H2AC ;
Lasso HIST1H2AC ; HIST1H2BG ; HIST1H2BF ; HIST1H2BE ; HIST1H2BH ; HIST1H2BI ; HIST1H3C ; HIST1H3E ; HIST1H3G ; HIST1H4D ; HIST1H4F ; HIST1H4C ; HIST1H4B ; HIST1H4E ; HIST1H1D ; HIST1H1E ; HIST1H3F ; HIST1H2AE ; HIST1H2BD ; HFE ;
PreSTIGE ;
ABC ;
BETA HIST1H4E ; HIST1H2BE ; HIST1H3B ; HIST1H3E ; HIST1H2BC ; HIST1H4C ; HFE ; HIST1H2AD ; HIST1H2AE ; HIST1H2BD ; HIST1H2BG ; HIST1H2AB ; HIST1H2AC ; HIST1H4D ; HIST1H3D ; HIST1H2BB ; HIST1H2BF ; HIST1H3C ; HIST1H1C ; HIST1H1E ; HIST1H1T ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_132000690 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers