SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_132000613
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Connective Tissue
Biosample name: HT1080_EWS-FLI1
Genomic region: chr12:6603002-6614801
Size: 11799
Super-enhancer rank 613
Number of SE elements: 2
ChIP density(Case|Control): 30880.3428|1657.7595
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CHD4 ;
ROSE Overlap CHD4 ;
ROSE Proximal LPAR5 ; IFFO1 ; ING4 ; ACRBP ; SCARNA11 ; NOP2 ;
ROSE Closest CHD4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA IFFO1 ; LPAR5 ; GAPDH ; NOP2 ; ZNF384 ; SCARNA11 ; CHD4 ; ACRBP ; ING4 ; PIANP ; SCARNA10 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_132000613 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers