Super-enhancer overview
| SE ID: | SE_02_132000577 |
| Species: | Human |
| Data source: | NCBI GEO/SRA |
| Biosample type: | Cell line |
| Tissue type: | Connective Tissue |
| Biosample name: | HT1080_EWS-FLI1 |
| Genomic region: | chr12:54016078-54020506 |
| Size: | 4428 |
| Super-enhancer rank | 577 |
| Number of SE elements: | 1 |
| ChIP density(Case|Control): | 30828.6216|559.6992 |
| Genome browser: | 
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Super-enhancer annotation
eQTL
eRNA1~5
5~10
10~MAX
Super-enhancer associated genes
| Strategies/Algorithm | Gene name |
| The closest active: | HOXC4 ; |
| ROSE Overlap | HOXC4 ; HOXC6 ; HOXC5 ; |
| ROSE Proximal | HOXC8 ; HOTAIR ; HOXC4 ; HOXC11 ; HOXC-AS2 ; HOXC5 ; HOXC6 ; HOXC9 ; HOXC-AS1 ; MIR196A2 ; FLJ12825 ; HOXC10 ; MIR615 ; HOXC-AS3 ; |
| ROSE Closest | HOXC4 ; |
| Lasso | ; |
| PreSTIGE | ; |
| ABC | ; |
| BETA | HOXC4 ; HOXC6 ; HOXC-AS3 ; LOC100240735 ; HOXC13-AS ; LOC100240734 ; HOTAIR ; HOXC5 ; FLJ12825 ; HOXC11 ; HOXC-AS2 ; HOXC-AS1 ; HOXC8 ; HOXC10 ; HOXC9 ; MIR615 ; MIR196A2 ; HOXC13 ; HOXC12 ; |