SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_132000436
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Connective Tissue
Biosample name: HT1080_EWS-FLI1
Genomic region: chr5:177491223-177497653
Size: 6430
Super-enhancer rank 436
Number of SE elements: 3
ChIP density(Case|Control): 36599.56|989.577
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDLIM7 ;
ROSE Overlap PDLIM7 ;
ROSE Proximal DOK3 ; PRR7 ; DDX41 ; DBN1 ; PRR7-AS1 ;
ROSE Closest PDLIM7 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PDLIM7 ; GRK6 ; DOK3 ; F12 ; DDX41 ; PRR7-AS1 ; FAM193B ; PRR7 ; DBN1 ; TMED9 ; PFN3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_132000436 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers