SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_132000180
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Connective Tissue
Biosample name: HT1080_EWS-FLI1
Genomic region: chr17:7833881-7845462
Size: 11581
Super-enhancer rank 180
Number of SE elements: 4
ChIP density(Case|Control): 55630.4916|1587.7551
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KDM6B ;
ROSE Overlap KDM6B ;
ROSE Proximal CYB5D1 ; CHD3 ; TMEM88 ; NAA38 ;
ROSE Closest KDM6B ;
Lasso CNTROB ; SHBG ; KDM6B ; TP53 ; WRAP53 ; TRAPPC1 ; EFNB3 ; KCNAB3 ; CHD3 ; NAA38 ; SAT2 ; CYB5D1 ; KRBA2 ;
PreSTIGE ;
ABC ;
BETA TMEM88 ; CHD3 ; TRAPPC1 ; CNTROB ; LOC284023 ; SCARNA21 ; NAA38 ; KDM6B ; CYB5D1 ; KCNAB3 ; RPL29P2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_132000180 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers