SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_132000018
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Connective Tissue
Biosample name: HT1080_EWS-FLI1
Genomic region: chr19:1244614-1267312
Size: 22698
Super-enhancer rank 18
Number of SE elements: 8
ChIP density(Case|Control): 126657.1098|3543.1578
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIDN ;
ROSE Overlap ATP5D ; MIDN ;
ROSE Proximal C19orf24 ; CIRBP ; CIRBP-AS1 ; STK11 ; CBARP ; EFNA2 ;
ROSE Closest MIDN ;
Lasso GAMT ; STK11 ; RPS15 ; CIRBP ; HMHA1 ; ATP5D ; GPX4 ; POLR2E ; SBNO2 ; DAZAP1 ; NDUFS7 ; MUM1 ; C19orf26 ; MIDN ;
PreSTIGE ;
ABC ;
BETA MUM1 ; C19orf26 ; CIRBP ; ATP5D ; EFNA2 ; CIRBP-AS1 ; C19orf24 ; STK11 ; SBNO2 ; MIDN ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_132000018 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers