SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_129500003
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Lung
Biosample name: JHU-LX48-SCLC PDX
Genomic region: chr19:5936005-5969181
Size: 33176
Super-enhancer rank 3
Number of SE elements: 27
ChIP density(Case|Control): 23627.9472|5507.216
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RANBP3;
ROSE Overlap RANBP3;
ROSE Proximal VMAC; NDUFA11; LOC100128568; CAPS;
ROSE Closest RANBP3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_129500003 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers