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Super-enhancer overview

SE ID: SE_02_128000065
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Bone
Biosample name: Mesenchymal stem cells_SPC_mutation_ EF1
Genomic region: chr2:176092561-176119430
Size: 26869
Super-enhancer rank 65
Number of SE elements: 1
ChIP density(Case|Control): 79599.4125|2880.3568
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXD11;
ROSE Overlap HOXD12; HOXD11; HOXD13; HOXD10;
ROSE Proximal HOXD8; HOXD4; HOXD9; EVX2; HOXD3; HOXD-AS2; MIR10B;
ROSE Closest HOXD11;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_128000065 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers