SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_127900958
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Bone
Biosample name: Mesenchymal stem cells
Genomic region: chr7:5677349-5704575
Size: 27226
Super-enhancer rank 958
Number of SE elements: 7
ChIP density(Case|Control): 28492.009|2924.0724
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF216-IT1;
ROSE Overlap RNF216; RNF216-IT1;
ROSE Proximal MIR6874;
ROSE Closest RNF216-IT1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_127900958 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers