SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_127600365
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Prostate
Biosample name: PC3_GSK126
Genomic region: chr11:65416281-65425376
Size: 9095
Super-enhancer rank 365
Number of SE elements: 7
ChIP density(Case|Control): 20173.6195|1897.217
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NEAT1;
ROSE Overlap NEAT1;
ROSE Proximal SLC25A45; FRMD8; MIR612;
ROSE Closest NEAT1;
Lasso SLC25A45; EHBP1L1; LTBP3; MAP3K11; DPF2; SSSCA1; SCYL1; FRMD8; PCNXL3; KCNK7; FAM89B;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_127600365 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers