SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_127200873
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Leiomyosarcoma
Biosample name: SK-LMS-1_HDAC4KO
Genomic region: chr3:23649499-23669638
Size: 20139
Super-enhancer rank 873
Number of SE elements: 8
ChIP density(Case|Control): 14312.7873|4217.1066
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UBE2E1;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest UBE2E1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_127200873 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers