SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_127200329
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Leiomyosarcoma
Biosample name: SK-LMS-1_HDAC4KO
Genomic region: chr19:1244618-1267022
Size: 22404
Super-enhancer rank 329
Number of SE elements: 12
ChIP density(Case|Control): 19769.2896|1931.2248
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIDN;
ROSE Overlap ATP5D; MIDN;
ROSE Proximal C19orf24; CIRBP; CIRBP-AS1; STK11; CBARP; EFNA2;
ROSE Closest MIDN;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_127200329 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers