SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_127200325
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Leiomyosarcoma
Biosample name: SK-LMS-1_HDAC4KO
Genomic region: chr4:146955910-146969758
Size: 13848
Super-enhancer rank 325
Number of SE elements: 7
ChIP density(Case|Control): 20806.62|2927.4672
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TTC29;
ROSE Overlap ;
ROSE Proximal TTC29;
ROSE Closest TTC29;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_127200325 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers