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Super-enhancer overview

SE ID: SE_02_125900859
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: Im-GCT-3504_G34W-repair_WT_4C7
Genomic region: chr10:17212972-17218002
Size: 5030
Super-enhancer rank 859
Number of SE elements: 1
ChIP density(Case|Control): 18586.353|1471.778
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VIM-AS1;
ROSE Overlap VIM-AS1;
ROSE Proximal VIM; TRDMT1;
ROSE Closest VIM-AS1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_125900859 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers