SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_125400817
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Bladder
Biosample name: Bladder tumor Basal1
Genomic region: chrX:153970523-153973912
Size: 3389
Super-enhancer rank 817
Number of SE elements: 1
ChIP density(Case|Control): 16474.6068|391.7684
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM187;
ROSE Overlap HCFC1; TMEM187;
ROSE Proximal MIR3202-1; NAA10; IRAK1; ARHGAP4; MIR718; HCFC1-AS1; MIR3202-2; RENBP;
ROSE Closest TMEM187;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_125400817 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers