SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_123500343
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Brain
Biosample name: Neuroblastoma PDX tumour cells
Genomic region: chr19:41990930-42000651
Size: 9721
Super-enhancer rank 343
Number of SE elements: 3
ChIP density(Case|Control): 17112.8484|792.2615
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATP1A3;
ROSE Overlap ATP1A3; GRIK5;
ROSE Proximal RABAC1; ATP1A3;
ROSE Closest ATP1A3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_123500343 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers