SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_123500288
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Brain
Biosample name: Neuroblastoma PDX tumour cells
Genomic region: chr3:119625225-119648538
Size: 23313
Super-enhancer rank 288
Number of SE elements: 13
ChIP density(Case|Control): 21492.2547|3762.7182
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: POPDC2;
ROSE Overlap PLA1A; POPDC2;
ROSE Proximal ADPRH; COX17; POPDC2; PLA1A;
ROSE Closest POPDC2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_123500288 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers