SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122900960
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr17:40435918-40476739
Size: 40821
Super-enhancer rank 960
Number of SE elements: 17
ChIP density(Case|Control): 21373.8756|5192.4312
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IGFBP4 ;
ROSE Overlap IGFBP4 ; TNS4 ;
ROSE Proximal TOP2A ;
ROSE Closest IGFBP4 ;
Lasso TNS4 ; TOP2A ; IGFBP4 ;
PreSTIGE ;
ABC STAT5A ; GHDC ; STAT5B ; STAT3 ; PTRF ; ATP6V0A1 ; NAGLU ; HSD17B1 ; LOC108783654 ; HCRT ; KCNH4 ; RAB5C ; HSPB9 ; KAT2A ; MLX ; COASY ; DHX58 ;
BETA TNS4 ; TOP2A ; IGFBP4 ; GJD3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122900960 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers