SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_122900936
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr21:42956932-42984625
Size: 27693
Super-enhancer rank 936
Number of SE elements: 12
ChIP density(Case|Control): 20938.6773|4538.8827
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PKNOX1 ;
ROSE Overlap PKNOX1 ;
ROSE Proximal ERVH48-1 ; PKNOX1 ; MIR5692B ;
ROSE Closest PKNOX1 ;
Lasso WDR4 ; NDUFV3 ; PKNOX1 ; CBS ; U2AF1 ;
PreSTIGE ;
ABC ;
BETA NDUFV3 ; WDR4 ; MIR5692B ; PKNOX1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122900936 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers