SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122900528
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr9:128760026-128799397
Size: 39371
Super-enhancer rank 528
Number of SE elements: 20
ChIP density(Case|Control): 28091.2085|5007.9912
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TBC1D13 ;
ROSE Overlap ZER1 ; TBC1D13 ;
ROSE Proximal ZDHHC12 ; ENDOG ; LOC100506100 ; C9orf114 ;
ROSE Closest TBC1D13 ;
Lasso WDR34 ; LRRC8A ; ZER1 ; ENDOG ; CCBL1 ; C9orf114 ;
PreSTIGE ;
ABC ;
BETA ENDOG ; TBC1D13 ; SET ; PKN3 ; C9orf114 ; ZDHHC12 ; LOC100506100 ; ZER1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122900528 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers