SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122900449
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr1:185244771-185316236
Size: 71465
Super-enhancer rank 449
Number of SE elements: 32
ChIP density(Case|Control): 33409.8875|8347.112
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IVNS1ABP ;
ROSE Overlap SWT1 ; IVNS1ABP ;
ROSE Proximal GS1-279B7.1 ;
ROSE Closest IVNS1ABP ;
Lasso SWT1 ; IVNS1ABP ; RNF2 ; TRMT1L ;
PreSTIGE ;
ABC IVNS1ABP ; GS1-279B7.1 ; HMCN1 ; NCF2 ; C1orf21 ; EDEM3 ; FAM129A ; RNF2 ; TRMT1L ; SWT1 ; TPR ; C1orf27 ; PLA2G4A ;
BETA IVNS1ABP ; GS1-279B7.1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122900449 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers