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Super-enhancer overview

SE ID: SE_02_122900440
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr17:42764242-42796483
Size: 32241
Super-enhancer rank 440
Number of SE elements: 12
ChIP density(Case|Control): 29529.5319|4133.2962
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WNK4 ;
ROSE Overlap WNK4 ; VPS25 ;
ROSE Proximal CNTD1 ; BECN1 ; PSME3 ; RAMP2 ; MIR6781 ; RAMP2-AS1 ; EZH1 ; COA3 ; AOC2 ;
ROSE Closest WNK4 ;
Lasso PLEKHH3 ; CNTNAP1 ; EZH1 ; WNK4 ; BECN1 ; TUBG1 ; PSME3 ; PSMC3IP ; VPS25 ; CNTD1 ; COA3 ;
PreSTIGE ;
ABC DBF4B ;
BETA AOC2 ; AOC3 ; CNTNAP1 ; PSME3 ; CNTD1 ; MIR6780A ; CCR10 ; RAMP2-AS1 ; BECN1 ; MIR6781 ; EZH1 ; COA3 ; AOC4P ; WNK4 ; RAMP2 ; VPS25 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122900440 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers