SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122900432
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr3:126872134-126932550
Size: 60416
Super-enhancer rank 432
Number of SE elements: 33
ChIP density(Case|Control): 29483.008|3806.208
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLXNA1 ;
ROSE Overlap CHCHD6 ;
ROSE Proximal ;
ROSE Closest PLXNA1 ;
Lasso PLXNA1 ; CHCHD6 ;
PreSTIGE ;
ABC ;
BETA PLXNA1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122900432 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers